rs623302 chr18:3604790 A>C
- Sequence
ttgtcacttagtgggtagtgaaat[A/C]agatgagtcatgcagtttcaccat
- ASB in cell types
- CD14+ monocytes K562 (myelogenous leukemia) fetal bone marrow-derived mononuclear cells
- ASB for transcription factors
- STAT1_HUMAN KMT2A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 0.54 | 3.18 | 1.67 | n/a | No Hit | |||
| KMT2A_HUMAN | n/a | 2.43 | 1.50 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Muscle_Skeletal, Nerve_Tibial, Pituitary, Thyroid, Whole_Blood