rs62347622 chr5:18466287 G>A
- Sequence
accattatttgctgccagcagagg[G/A]cagtagaaggcttccacaggacga
- ASB in cell types
- A549 (lung carcinoma) 22RV1 (prostate carcinoma) H929 (plasma cell myeloma) hepatocytes
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.35 | -0.26 | 1.58 | -4.82 | Concordant | |||
| RAD21_HUMAN | 1.86 | -0.60 | 1.92 | n/a | n/a |
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Motif analysis
