rs62377655 chr5:159444673 T>A
- Sequence
gagttggatcactagagggcaata[T/A]cggccaagagaaagaagaattctt
- ASB in cell types
- GM12878 (female B-cells) LNCaP (prostate carcinoma) LNCaP C4-2B (prostate carcinoma)
- ASB for transcription factors
- CTCF_HUMAN ZBTB2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.38 | -0.43 | 1.29 | n/a | No Hit | |||
| ZBTB2_HUMAN | 2.32 | -2.67 | 1.33 | n/a | n/a |
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