rs62399822 chr6:23728885 T>C
- Sequence
attgctggcttatgcaaacatctg[T/C]aggcaggcagttgtgcagcaaggc
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN ESR1_HUMAN GATA3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 0.84 | 0.98 | 1.74 | n/a | No Hit | |||
| ESR1_HUMAN | 0.13 | 0.90 | 1.50 | n/a | No Hit | |||
| GATA3_HUMAN | -0.44 | 1.13 | 1.42 | n/a | No Hit |
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