rs62480666 chr7:155344846 C>T
- Sequence
gtgggagggcgctttcagcctcct[C/T]ctcccacacacctgtcccgccagc
- ASB in cell types
- A549 (lung carcinoma) HEK293 (embryonic kidney) K562 (myelogenous leukemia)
- ASB for transcription factors
- RAD21_HUMAN SMC3_HUMAN ZN335_HUMAN ZFHX2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | 1.30 | -0.27 | 2.00 | n/a | n/a | |||
| SMC3_HUMAN | 0.96 | -0.35 | 2.00 | n/a | n/a | |||
| ZN335_HUMAN | 2.28 | n/a | 2.00 | n/a | No Hit | |||
| ZFHX2_HUMAN | 2.35 | n/a | 2.00 | n/a | n/a | |||
| CTCF_HUMAN | 0.80 | 0.69 | 1.71 | n/a | No Hit |
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