rs62496680 chr8:19779717 C>G
- Sequence
tgatctttccaccactagatgtca[C/G]tagcacacccccactccccacccc
- ASB in cell types
- neural cell MM1.S (plasma cell myeloma) erythroid progenitors HCT-116 (colon carcinoma)
- ASB for transcription factors
- CTCF_HUMAN ZBTB2_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.35 | 0.47 | 1.22 | -0.73 | Weak Concordant | |||
| ZBTB2_HUMAN | 2.20 | n/a | 1.33 | n/a | n/a |
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Motif analysis
