rs62496681 chr8:19779727 C>T
- Sequence
accactagatgtcactagcacacc[C/T]ccactccccacccccagtcaagac
- ASB in cell types
- neural cell MM1.S (plasma cell myeloma) AG04449 (fibroblasts) HCT-116 (colon carcinoma)
- ASB for transcription factors
- CTCF_HUMAN SMC3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.37 | 0.46 | 1.34 | n/a | No Hit | |||
| SMC3_HUMAN | -1.21 | 1.42 | 1.00 | n/a | n/a |
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