rs625527 chr18:2968754 C>A
- Sequence
agtttgagggacaagagtgagatg[C/A]cacaaggcctttgaccctgtgcaa
- ASB in cell types
- CD14+ monocytes GM12878 (female B-cells)
- ASB for transcription factors
- STAT1_HUMAN FOXK2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | n/a | 2.55 | 2.00 | n/a | No Hit | |||
| FOXK2_HUMAN | n/a | 1.51 | 1.33 | n/a | n/a |
Items per page:
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration, advanced age-related macular degeneration (choroidal neovascularization) vs. no amd, comorbid depressive syndrome and alcohol dependence, cystatin c in serum, irritible bowel syndrome, partial epilepsy, sporadic creutzfeldt-jakob disease
GTEx eQTL Adipose_Visceral_Omentum, Brain_Cerebellum, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Muscularis, Heart_Left_Ventricle, Lung, Nerve_Tibial, Prostate, Thyroid