rs62582090 chr9:131755931 A>T
- Sequence
ggctttttttcctgctcctatgcc[A/T]ctggcaccttgtggccgccccccc
- ASB in cell types
- foreskin keratinocyte neural cell pancreas GM12878 (female B-cells)
- ASB for transcription factors
- CTCF_HUMAN SMC3_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.07 | 0.29 | 1.45 | -1.72 | Weak Concordant | |||
| SMC3_HUMAN | 1.49 | -1.32 | 1.00 | n/a | n/a |
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Motif analysis
