rs626040 chr10:5873662 T>C
- Sequence
tgctggtggattctagcaacgtcc[T/C]gggttaaattaaattcagtgcttg
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) HUVEC (umbilical vein endothelial cells) foreskin keratinocyte HeLa Kyoto (cervical adenocarcinoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.87 | 0.85 | 1.52 | n/a | No Hit |
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