rs62648277 chr1:206924232 G>A
- Sequence
gtgtgtgtgctctgtagagtgtgt[G/A]agtgtgtggcgtgtggctatgagt
- ASB in cell types
- HEK293 (embryonic kidney) GM12878 (female B-cells) MCF7 (Invasive ductal breast carcinoma) K562 (myelogenous leukemia)
- ASB for transcription factors
- ENL_HUMAN HDGF_HUMAN IKZF2_HUMAN BMI1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ENL_HUMAN | 2.48 | n/a | 2.11 | n/a | n/a | |||
| HDGF_HUMAN | 2.47 | -3.49 | 2.11 | n/a | n/a | |||
| IKZF2_HUMAN | 2.44 | -2.68 | 1.33 | n/a | n/a | |||
| BMI1_HUMAN | 2.80 | -3.22 | 1.33 | n/a | n/a | |||
| NFAC3_HUMAN | 2.56 | -2.81 | 1.33 | n/a | No Hit |
Items per page:
1 – 5 of 26
Motif analysis
