rs627601 chr20:47642854 G>A
- Sequence
gtcctgttcctgtttacatacccc[G/A]ccttatgaaaacatgccattcaca
- ASB in cell types
- breast tumor tissue T47D (invasive ductal carcinoma) LHSAR (prostate epithelial cells)
- ASB for transcription factors
- FOXA1_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 1.13 | 0.28 | 1.56 | n/a | No Hit | |||
| ANDR_HUMAN | 1.96 | -0.08 | 2.58 | n/a | No Hit |
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