rs628042 chr2:225022427 A>G
- Sequence
gttttgccagccaaaatcaataca[A/G]tcgggctccacaactggctccaag
- ASB in cell types
- VCaP (prostate carcinoma) ZR-75-1 (invasive ductal carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 0.04 | 2.07 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP aortic valve calcium, hdl cholesterol change with statins, rheumatoid arthritis, triglycerides change with statins