rs629018 chr19:34232827 C>T
- Sequence
gtggtttgagacattctgtaaatc[C/T]ggttccaagagcacgaggtaggac
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- IKZF1_HUMAN ERR1_HUMAN NFIC_HUMAN MITF_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | 1.99 | -1.47 | 2.00 | n/a | No Hit | |||
| ERR1_HUMAN | 2.14 | -1.97 | 2.00 | n/a | No Hit | |||
| NFIC_HUMAN | 2.30 | n/a | 2.00 | n/a | No Hit | |||
| MITF_HUMAN | 1.96 | -1.81 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP crohns disease, irritible bowel syndrome, mitral annular calcium, obesity with early age of onset (age >2)