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rs629181 chr18:71398818 C>T

Sequence
ctgcagcatatcacagaaacctaa[C/T]tatagtggcttagctgaaagagaa
ASB in cell types
neural cell
ASB for transcription factors
SMC3_HUMAN RAD21_HUMAN CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMC3_HUMAN -1.81 1.99 1.004.4·10-4 1.00 n/a n/a
RAD21_HUMAN 0.98 1.21 1.004.5·10-3 1.28 n/a n/a
CTCF_HUMAN 0.77 1.46 1.000.04 1.17 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol

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