rs629252 chr11:125987475 G>C
- Sequence
tgaagtacacatgagatcttccat[G/C]taaacaggctgggaattatgtaat
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- NFIL3_HUMAN CEBPA_HUMAN FOXA3_HUMAN FOXP1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NFIL3_HUMAN | 2.08 | -0.33 | 1.42 | n/a | n/a | |||
| CEBPA_HUMAN | 2.15 | -2.39 | 1.33 | n/a | No Hit | |||
| FOXA3_HUMAN | 2.19 | -2.45 | 1.33 | -4.74 | Concordant | |||
| FOXP1_HUMAN | 1.98 | -2.01 | 1.33 | -4.58 | Concordant | |||
| RARA_HUMAN | 1.67 | -1.56 | 1.33 | n/a | No Hit |
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Motif analysis
