rs630099 chr6:145091311 G>T
- Sequence
tcctgagaacactattgcataaga[G/T]tggcagtgggctaggggctaggca
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- CEBPA_HUMAN TEAD3_HUMAN HLF_HUMAN SOX13_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CEBPA_HUMAN | 0.74 | 2.87 | 2.00 | n/a | No Hit | |||
| TEAD3_HUMAN | n/a | 2.61 | 2.00 | n/a | n/a | |||
| HLF_HUMAN | 2.39 | n/a | 2.00 | n/a | No Hit | |||
| SOX13_HUMAN | -2.02 | 2.08 | 2.00 | n/a | n/a | |||
| ZN644_HUMAN | n/a | 2.54 | 2.00 | n/a | n/a |
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Motif analysis
