rs631106 chr1:62436136 C>A
- Sequence
tcagctctacagcattcgcctgag[C/A]atgtattgttatccgtggcagcgc
- ASB in cell types
- K562 (myelogenous leukemia) CD14+ monocytes
- ASB for transcription factors
- STAT1_HUMAN ZFX_HUMAN ZNF24_HUMAN TAL1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 1.52 | n/a | 2.50 | n/a | No Hit | |||
| ZFX_HUMAN | -0.31 | 1.40 | 1.08 | n/a | No Hit | |||
| ZNF24_HUMAN | 0.19 | 1.52 | 1.78 | n/a | n/a | |||
| TAL1_HUMAN | -0.35 | 1.21 | 1.67 | n/a | No Hit | |||
| HDAC2_HUMAN | -1.30 | 1.50 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP cystatin c in serum, hdl cholesterol, ldl cholesterol, serum creatinine, total cholesterol, triglycerides
GTEx eQTL Adrenal_Gland, Artery_Aorta, Artery_Tibial, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Ovary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Small_Intestine_Terminal_Ileum, Spleen, Stomach, Testis, Thyroid, Whole_Blood