rs631637 chr6:158468100 G>C
- Sequence
cgcttacagactccctgctgagtc[G/C]tgtaaacagttgcgactccactcg
- ASB in cell types
- HUES64 (embryonic stem cells) breast tumour metastasis breast tumor tissue
- ASB for transcription factors
- FOXA1_HUMAN NANOG_HUMAN FOXA2_HUMAN ESR1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 1.53 | -0.61 | 1.92 | -0.95 | Weak Concordant | |||
| NANOG_HUMAN | 2.09 | 0.22 | 1.33 | n/a | No Hit | |||
| FOXA2_HUMAN | 1.85 | 0.49 | 1.33 | -1.26 | Weak Concordant | |||
| ESR1_HUMAN | 1.39 | -2.59 | 2.17 | n/a | No Hit |
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Motif analysis
