rs634988 chr7:43824687 C>T
- Sequence
ctaattggttatgttatctacaga[C/T]tccagacattgtatagaatagcac
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- ARI1B_HUMAN TAL1_HUMAN MTG16_HUMAN HTF4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ARI1B_HUMAN | 1.36 | n/a | 2.00 | n/a | n/a | |||
| TAL1_HUMAN | 2.43 | n/a | 2.00 | -0.75 | Weak Concordant | |||
| MTG16_HUMAN | 2.51 | n/a | 2.00 | n/a | n/a | |||
| HTF4_HUMAN | 2.56 | n/a | 2.00 | n/a | No Hit | |||
| SMCA4_HUMAN | 2.16 | -0.93 | 2.00 | n/a | n/a |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Nucleus_accumbens_basal_ganglia, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Heart_Atrial_Appendage, Heart_Left_Ventricle, Muscle_Skeletal, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid, Whole_Blood