ADASTRA v1.6.10
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rs635096
chr6:140845117
C
>
T
Sequence
ttgtagttgagccttcattttcac[C/T]tccccaagcaaaggccttcctcaa
ASB in cell types
monocyte-derived dendritic cells
ASB for transcription factors
SPI1_HUMAN
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Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPI1_HUMAN
n/a
2.72
1.00
1.9·10
-4
2.50
4.75
Concordant
Items per page:
5
1 – 1 of 1
Motif analysis
SPI1_HUMAN
Concordant
Show reverse complement
Show rev. comp.
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Genetic associations
GRASP
hdl cholesterol
,
ldl cholesterol change with statins
GTEx eQTL
Brain_Cerebellar_Hemisphere
,
Brain_Cerebellum
,
Brain_Hippocampus
,
Brain_Hypothalamus
,
Brain_Spinal_cord_cervical_c-1
,
Brain_Substantia_nigra
,
Cells_Cultured_fibroblasts
,
Nerve_Tibial
,
Pituitary
,
Spleen
,
Testis
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)
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