rs636317 chr11:60251677 C>T
- Sequence
accgtcctcaggacactttgctgc[C/T]atctgctgggaaattgtgaaaagt
- ASB in cell types
- pancreas neural cell Peyer's patch adrenal gland
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.28 | -0.39 | 1.39 | -5.57 | Concordant | |||
| RAD21_HUMAN | 2.59 | -1.83 | 1.22 | n/a | n/a |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Colon_Sigmoid, Colon_Transverse, Lung, Nerve_Tibial, Skin_Sun_Exposed_Lower_leg, Spleen, Testis, Whole_Blood