rs636341 chr11:60251688 A>C
- Sequence
gacactttgctgccatctgctggg[A/C]aattgtgaaaagtacacaaaaagt
- ASB in cell types
- pancreas neural cell Peyer's patch adrenal gland
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.25 | -0.60 | 1.34 | 2.01 | Discordant | |||
| RAD21_HUMAN | 2.85 | n/a | 1.00 | n/a | n/a |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Colon_Transverse, Lung, Nerve_Tibial, Pancreas, Spleen, Stomach, Whole_Blood