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rs638880 chr6:142761926 G>T

Sequence
acaccagcctcctgggactccaca[G/T]aaacaggaaacgcaatctggccac
ASB in cell types
GM12878 (female B-cells)
ASB for transcription factors
MEF2B_HUMAN IKZF1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MEF2B_HUMAN 1.85 -2.10 4.3·10-31.00 1.33 n/a No Hit
IKZF1_HUMAN 1.44 -0.58 0.020.99 1.33 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP birth weight body mass index (bmi) depression scale of the revised neo personality inventory height schizophrenia sporadic creutzfeldt-jakob disease tetrology of fallot
GTEx eQTL Brain_Caudate_basal_ganglia

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