rs6425756 chr1:31471569 A>C
- Sequence
ctattggctaggattggaccgcac[A/C]gtgtaagctaattccgattggcta
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- MYBB_HUMAN TIF1A_HUMAN E2F1_HUMAN KDM1A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MYBB_HUMAN | 2.24 | n/a | 1.33 | n/a | n/a | |||
| TIF1A_HUMAN | 1.32 | -1.00 | 1.33 | n/a | n/a | |||
| E2F1_HUMAN | 1.55 | -1.56 | 1.33 | n/a | No Hit | |||
| KDM1A_HUMAN | 1.69 | -0.46 | 1.33 | n/a | n/a | |||
| MITF_HUMAN | 1.18 | -1.46 | 1.33 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Tibial, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Kidney_Cortex, Lung, Muscle_Skeletal, Nerve_Tibial, Pituitary, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid, Whole_Blood