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rs6441957 chr3:46297732 G>A

Sequence
cccttcctcccacggccctagagc[G/A]ctcctgataagcatccagcagggt
ASB in cell types
GM12878 (female B-cells) Jurkat (T-cells)
ASB for transcription factors
MYB_HUMAN IKZF1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MYB_HUMAN -0.32 1.25 1.004.6·10-3 1.50 n/a No Hit
IKZF1_HUMAN -0.78 1.52 1.000.01 1.33 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP total cholesterol change with statins years of education
GTEx eQTL Adipose_Visceral_Omentum Cells_Cultured_fibroblasts Esophagus_Gastroesophageal_Junction Lung Nerve_Tibial Skin_Sun_Exposed_Lower_leg Whole_Blood

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