ADASTRA v1.6.10
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Soos
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adastra.autosome.org
rs6441991
chr3:46442792
T
>
A
Sequence
gtcgtgaaatgtactcttggcaaa[T/A]ggaggaaaaggaacaggggaagat
ASB for transcription factors
CTCF_HUMAN
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Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN
0.70
0.28
0.03
1.00
1.17
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
celiac disease
,
hdl cholesterol
,
ldl cholesterol
,
simpson-angus scale
,
total cholesterol
,
triglycerides
,
type 1 diabetes, rheumatoid arthritis, combined case analysis
GTEx eQTL
Cells_Cultured_fibroblasts
,
Esophagus_Mucosa
,
Muscle_Skeletal
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)