rs6466121 chr7:106542637 T>C
- Sequence
tagagtcaagttcactccactaaa[T/C]atcatacctgccaggagggggcag
- ASB in cell types
- K562 (myelogenous leukemia) A549 (lung carcinoma) AG10803 (fibroblasts) HCPEpiC (choroid plexus epithelial cells)
- ASB for transcription factors
- RAD21_HUMAN CTCF_HUMAN NFRKB_HUMAN SMC3_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | 1.19 | -0.16 | 1.81 | n/a | n/a | |||
| CTCF_HUMAN | 1.05 | 0.46 | 1.42 | n/a | No Hit | |||
| NFRKB_HUMAN | 0.34 | 2.25 | 1.44 | n/a | n/a | |||
| SMC3_HUMAN | 1.19 | -0.46 | 2.00 | n/a | n/a | |||
| MNT_HUMAN | 0.10 | 1.34 | 1.50 | n/a | n/a |
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