ADASTRA v1.6.10
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rs647160
chr8:60052156
G
>
T
Sequence
ttcatcattttcacctcatgaaag[G/T]ttacatgaaaggttttttcttgtt
ASB in cell types
K562 (myelogenous leukemia)
GM12878 (female B-cells)
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Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
K562 (myelogenous leukemia)
-0.28
0.93
1.00
3.6·10
-22
2.00
GM12878 (female B-cells)
0.71
0.48
1.7·10
-3
0.55
1.30
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Motif analysis
No data available
Genetic associations
GTEx eQTL
Esophagus_Gastroesophageal_Junction
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
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