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rs647340 chr11:69497477 T>C

Sequence
ggaatgccggcccgcatggcacag[T/C]cccagagcggggcctttgtgtgca
ASB in cell types
HepG2 (hepatoblastoma) T47D (invasive ductal carcinoma)
ASB for transcription factors
FOXA1_HUMAN ATF2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA1_HUMAN 0.95 0.15 0.011.00 1.60 n/a No Hit
ATF2_HUMAN 1.20 -1.49 0.041.00 1.33 n/a No Hit
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Motif analysis

No data available

Genetic associations

No data available

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