ADASTRA v1.6.10
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rs6478939
chr9:130043516
G
>
T
Sequence
caccgatgctccgccgcggtctga[G/T]atcgctcccctgcgcgtatcgccg
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
HEK293T (embryonic kidney)
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Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
MCF7 (Invasive ductal breast carcinoma)
0.83
0.13
7.9·10
-6
0.89
1.74
HEK293T (embryonic kidney)
-0.65
1.28
1.00
3.6·10
-3
2.04
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Motif analysis
No data available
Genetic associations
GTEx eQTL
Skin_Sun_Exposed_Lower_leg
,
Thyroid
,
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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