rs648446 chr12:113649265 C>G
- Sequence
cttctgaatttatcagctctggtt[C/G]cctcggtccccggagaactgccct
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- RFX1_HUMAN TAL1_HUMAN NRF1_HUMAN ZEB2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RFX1_HUMAN | -3.03 | 2.33 | 2.00 | 4.62 | Concordant | |||
| TAL1_HUMAN | -0.03 | 1.71 | 2.00 | n/a | No Hit | |||
| NRF1_HUMAN | -0.32 | 1.04 | 2.00 | n/a | No Hit | |||
| ZEB2_HUMAN | -0.15 | 2.07 | 2.00 | n/a | n/a | |||
| HDAC2_HUMAN | -2.09 | 1.96 | 2.00 | n/a | n/a |
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Motif analysis
