rs6487419 chr12:24814536 T>C
- Sequence
tccccaaaagcagaactgaaactg[T/C]agctttaataaaaagctccaacaa
- ASB in cell types
- CD14+ monocytes germinal center B-cells
- ASB for transcription factors
- STAT1_HUMAN SPI1_HUMAN BCL6_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | -2.97 | 2.11 | 2.50 | n/a | No Hit | |||
| SPI1_HUMAN | -0.18 | 1.48 | 1.83 | n/a | No Hit | |||
| BCL6_HUMAN | -0.12 | 1.62 | 2.17 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Brain_Caudate_basal_ganglia, Brain_Frontal_Cortex_BA9, Brain_Hippocampus, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Heart_Left_Ventricle, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid