rs6497209 chr15:85486366 G>A
- Sequence
atttattcctatgttttcatctag[G/A]aattgtataggtttagttagctct
- ASB in cell types
- foreskin keratinocyte
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| foreskin keratinocyte | 1.18 | -0.91 | 3.00 |
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Motif analysis
No data available
Genetic associations
GRASP chronic kidney disease, college completion, cystatin c in serum, hdl cholesterol, refractive error, systolic blood pressure (sbp), years of education
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Brain_Anterior_cingulate_cortex_BA24, Brain_Cortex, Brain_Hippocampus, Colon_Sigmoid, Esophagus_Mucosa, Esophagus_Muscularis, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid