rs649737 chr22:20157140 T>G
- Sequence
tccaggacttatgtgcaggtaccg[T/G]ttggagctgtggtgcagttcccag
- ASB in cell types
- K562 (myelogenous leukemia) HEK293 (embryonic kidney) foreskin keratinocyte GM12878 (female B-cells)
- ASB for transcription factors
- RAD21_HUMAN KDM1A_HUMAN HDAC1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | 1.28 | -0.09 | 1.69 | n/a | n/a | |||
| KDM1A_HUMAN | 2.89 | n/a | 4.00 | n/a | n/a | |||
| HDAC1_HUMAN | 1.95 | n/a | 4.33 | n/a | n/a |
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