rs650129 chr2:67446798 C>G
- Sequence
ttcttctgactcatgctctgcaca[C/G]tgagcagtgacaggacagtctgtg
- ASB in cell types
- VCaP (prostate carcinoma) MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN SP7_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 1.21 | 0.28 | 1.85 | n/a | No Hit | |||
| SP7_HUMAN | 1.64 | -1.89 | 1.33 | n/a | n/a |
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