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rs650149 chr2:104785784 A>G

Sequence
tcccgagtagctgggattattagc[A/G]tgtaccaccatgcctggctaattt
ASB in cell types
HEK293 (embryonic kidney)

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HEK293 (embryonic kidney) -0.60 1.23 1.001.8·10-3 1.33
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Subcutaneous Brain_Amygdala Brain_Anterior_cingulate_cortex_BA24 Brain_Caudate_basal_ganglia Brain_Cerebellar_Hemisphere Brain_Cerebellum Brain_Cortex Brain_Frontal_Cortex_BA9 Brain_Hippocampus Brain_Hypothalamus Brain_Nucleus_accumbens_basal_ganglia Brain_Putamen_basal_ganglia Brain_Spinal_cord_cervical_c-1 Brain_Substantia_nigra Cells_Cultured_fibroblasts Skin_Sun_Exposed_Lower_leg

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