rs6501546 chr17:72465499 T>C
- Sequence
tatgcacacctgcacacacataca[T/C]acatacatacaagcatgcacaaga
- ASB in cell types
- GM12878 (female B-cells) HepG2 (hepatoblastoma) foreskin keratinocyte
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.92 | 1.36 | 1.63 | n/a | No Hit |
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