rs6501736 chr17:74779219 G>A
- Sequence
tatgtccccatttcttgtatctcc[G/A]gttgtttaaggggtcctctcacat
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- ATF3_HUMAN CEBPB_HUMAN SMCA4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF3_HUMAN | n/a | 2.09 | 2.00 | n/a | No Hit | |||
| CEBPB_HUMAN | -0.00 | 1.15 | 1.67 | n/a | No Hit | |||
| SMCA4_HUMAN | -1.63 | 2.08 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Brain_Cerebellum, Cells_Cultured_fibroblasts, Colon_Sigmoid, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Nerve_Tibial, Testis