rs650540 chr18:37322610 G>C
- Sequence
atctgtgtcaatggcccattcagg[G/C]cactaggggtctctggactccaag
- ASB in cell types
- neural progenitors SUM159PT (pleiomorphic breast carcinoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.94 | 2.00 | 1.17 | 3.20 | Concordant |
Items per page:
1 – 1 of 1
Motif analysis
