rs6510596 chr19:1099507 G>T
- Sequence
gggaggagaatcgcttgaacctgg[G/T]aggtggaggttgcagtgagccgag
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- MAFG_HUMAN EMSY_HUMAN ARI1B_HUMAN EGR1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MAFG_HUMAN | n/a | 0.86 | 2.00 | n/a | No Hit | |||
| EMSY_HUMAN | n/a | 2.39 | 2.00 | n/a | n/a | |||
| ARI1B_HUMAN | n/a | 2.54 | 2.00 | n/a | n/a | |||
| EGR1_HUMAN | -1.35 | 1.90 | 2.00 | -0.39 | Weak Discordant | |||
| HDAC1_HUMAN | -1.14 | 1.77 | 2.00 | n/a | n/a |
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Motif analysis
Genetic associations
GTEx eQTL Adrenal_Gland, Artery_Tibial, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Muscle_Skeletal, Nerve_Tibial, Ovary, Pancreas, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Stomach, Thyroid, Whole_Blood