rs6510665 chr19:2395876 T>C
- Sequence
aaaaaaattagccacgcgtggtcg[T/C]gggtgcctgtagtcccagctactc
- ASB in cell types
- HepG2 (hepatoblastoma) HEK293 (embryonic kidney)
- ASB for transcription factors
- ATF7_HUMAN HDAC2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF7_HUMAN | 2.14 | -1.87 | 1.33 | n/a | n/a | |||
| HDAC2_HUMAN | 2.07 | -2.11 | 1.33 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Cortex, Esophagus_Mucosa, Liver, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid, Whole_Blood