rs651717 chr1:70142370 G>T
- Sequence
aatacttcggctttataatgtttg[G/T]gcatttctctttaacatcctcaaa
- ASB in cell types
- VCaP (prostate carcinoma) K562 (myelogenous leukemia)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.43 | 1.12 | 1.67 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP bipolar disorder, comorbid depressive syndrome and alcohol dependence, irritible bowel syndrome, sporadic creutzfeldt-jakob disease, tetrology of fallot, transmission distortion, waist hip ratio
GTEx eQTL Artery_Aorta, Artery_Tibial, Cells_Cultured_fibroblasts, Nerve_Tibial, Thyroid, Whole_Blood