rs652108 chr1:230176958 C>T
- Sequence
accagcccgccaaggctacagttc[C/T]tcccttcctgccattttcacggca
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- PRD10_HUMAN ARI1B_HUMAN ETV1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PRD10_HUMAN | 3.06 | n/a | 3.00 | n/a | n/a | |||
| ARI1B_HUMAN | 1.20 | n/a | 2.50 | n/a | n/a | |||
| ETV1_HUMAN | 2.06 | n/a | 2.50 | -4.21 | Concordant |
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Motif analysis
