rs653765 chr15:58749813 T>C
- Sequence
gttccctcttctctccccccctcc[T/C]tcgaaactcagacctccgcctcct
- ASB in cell types
- CD14+ monocytes T47D (invasive ductal carcinoma)
- ASB for transcription factors
- STAT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 1.40 | -3.60 | 2.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP adiponectin levels, hdl cholesterol, hdl cholesterol change with statins, infant head circumference, total cholesterol, urinary albumin-to-creatinine ratio
GTEx eQTL Artery_Aorta, Artery_Tibial, Brain_Hippocampus, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Heart_Left_Ventricle, Muscle_Skeletal, Nerve_Tibial, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid, Whole_Blood