rs654039 chr6:137794129 T>C
- Sequence
cttgggaggggcagagcttcagaa[T/C]aggagagagaaggcgtcagtcacc
- ASB in cell types
- HepG2 (hepatoblastoma)
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| HepG2 (hepatoblastoma) | 0.71 | -0.23 | 2.01 |
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Motif analysis
No data available
Genetic associations
GRASP irritible bowel syndrome, ldl cholesterol, ldl cholesterol change with statins, neuroblastoma (brain cancer), rheumatoid arthritis, total cholesterol, waist hip ratio