rs6540698 chr1:211633728 T>C
- Sequence
ccgcgagcaggagaatgcaagagc[T/C]gggagatgcggagcacacgggaag
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- IKZF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | 2.16 | n/a | 3.00 | -3.81 | Concordant |
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Motif analysis
