rs654220 chr1:41536885 A>T
- Sequence
taaataacctgcccaaggtcacac[A/T]gccagttaatggagtcagaatttg
- ASB in cell types
- SK-BR-3 (breast adenocarcinoma)
- ASB for transcription factors
- ERR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ERR1_HUMAN | 1.80 | -0.88 | 1.88 | -3.56 | Concordant |
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Motif analysis
