rs654312 chr18:352074 C>T
- Sequence
gcattggcagtgagtatgacattt[C/T]gctgagtaattattatttttaaaa
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- MAFG_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MAFG_HUMAN | -1.37 | 1.60 | 1.00 | 2.12 | Concordant |
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Motif analysis
Genetic associations
GRASP adiponectin levels, advanced age-related macular degeneration, ldl cholesterol, total cholesterol