ADASTRA v1.6.10
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rs654351
chr6:10414773
G
>
C
Sequence
agggagcatccacgtcctctctct[G/C]cagcttctcccccgcgttcttcgg
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
ZNF24_HUMAN
RING2_HUMAN
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Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZNF24_HUMAN
0.93
2.90
0.40
8.8·10
-3
2.17
n/a
n/a
RING2_HUMAN
n/a
2.56
1.00
0.01
3.00
n/a
n/a
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5
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Motif analysis
No data available
Genetic associations
EMBL-EBI
squamous cell lung carcinoma
GRASP
aortic valve calcium
,
birth weight
,
fasting blood glucose
,
hdl cholesterol
GTEx eQTL
Nerve_Tibial
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
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log2(Alt/Ref motif p-value)